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2011

Journal Articles

JA Noble, N Navab, H Becher.
Review: Ultrasonic image analysis and image-guided interventions.
Interface Focus, 16 May 2011. Published online June 2011.
http://dx.doi.org/10.1098/rsfs.2011.0025

K Murphy, B van Ginneken, JM Reinhardt, S Kabus, K Ding, X Deng, K Cao, K Du, GE Christensen, V Garcia, T Vercauteren, N Ayache, O Commowick, G Malandain, B Glocker, N Paragios, N Navab, V Gorbunova, J Sporring, M de Bruijne, X Han, MP Heinrich, JA Schnabel, M Jenkinson, C Lorenz, M Modat, JR McClelland, S Ourselin, SEA Muenzing, MA Viergever, D De Nigris, DL Collins, T Arbel, M Peroni, R Li, GC Sharp, A Schmidt-Richberg, J Ehrhardt, R Werner, D Smeets, D Loeckx, G Song, N Tustison, B Avants, JC Gee, M Staring, S Klein, B C. Stoel, M Urschler, M Werlberger, J Vandemeulebroucke, S Rit, D Sarrut, JPW Pluim.
Evaluation of registration methods on thoracic CT: The EMPIRE10 challenge.
IEEE Transactions on Medical Imaging 2011. 30 Nov(11):1901-20.
http://dx.doi.org/10.1109/TMI.2011.2158349. Epub 2011 May 31

P.Orlowski, F. Al-Senani, P.Summers, J.Byrne, J.A.Noble, Y.Ventikos
Towards treatment planning for the embolization of arteriovenous malformations of the brain: intranidal haemodynamics modeling.
IEEE Transactions on Biomedical Engineering 58(7):1994-2001, 2011.
http://dx.doi.org/10.1109/TBME.2011.2119317

HY Baluwala, KA Saddi, JA Schnabel.
Non-rigid chest image registration with preservation of topology and rigid structures.
Annals of the British Machine Vision Association Vol. 2011, No. 4, pp 1−15 (2011)

MP Heinrich, M Jenkinson, FV Gleeson, JM Brady, JA Schnabel.
Deformable multimodal registration with gradient orientation based on structure tensors.
Annals of the British Machine Vision Association. Vol. 2011, No. 2, pp 1–11 (2011)

C Ioannou, I Sarris, MK Yaqub, JA Noble, MK Javaid, AT Papageorghiou.
Surface area measurement using rendered three-dimensional ultrasound imaging: an in vitro phantom study.
Ultrasound Obstet Gynecol, 2011 Oct; 38(4):445-9
http://dx.doi.org/10.1002/uog.8984

W Zhang, JM Brady, H Becher, JA Noble.
Spatio-temporal (2D+T) non-rigid registration of real-time 3D echocardiography and cardiovascular MR image sequences.
Physics in Medicine and Biology 2011 Mar 7; 56(5):1341-60
http://dx.doi.org/10.1088/0031-9155/56/5/008

H.-D. Liang, J. A. Noble, and P. N. T. Wells.
Recent advances in biomedical ultrasonic imaging techniques.
Interface Focus 6 August 2011, 1(4):475-476. Published June 2011.
http://dx.doi.org/10.1098/rsfs.2011.0042

K Rajpoot, V Grau, JA Noble, H Becher, C Szmigielski.
The evaluation of single-view and multi-view fusion 3D echocardiography using image-driven segmentation and tracking.
Medical Image Analysis, 15(4):514-528, August 2011.
http://dx.doi.org/10.1016/j.media.2011.02.007

K Rajpoot, V Grau, JA Noble, C Szmigielski, H Becher.
Multi-view fusion 3D echocardiography: Improving the information and quality of real-time 3D echocardiography.
Ultrasound in Medicine & Biology, 37(7):1056-1072, July 2011.
http://dx.doi.org/0.1016/j.ultrasmedbio.2011.04.018

J Thiyagalingam, D Goodman, J Schnabel, A Trefethen, V Grau.
On the usage of GPUs for Efficient Motion Estimation in Medical Image Sequences.
International Journal of Biomedical Imaging. Volume 2011 (2011), Article ID 137604, 15 pages.
http://dx.doi.org/10.1155/2011/137604.

R English, J Li, R Adams, V Parulekar, A Parker, D Roskell, Y Chi, JA Noble Pilot Study: Comparison of breast cancer tumour sizing using B-mode ultrasound, elastography and histology. British Journal of Radiology, 2011 November; 84(1007):1011-1019. http://dx.doi.org/10.1259/bjr/13216246

Books

 

D Rueckert and JA Schnabel. Medical image registration. In: Biomedical Image Processing (TM Deserno, Ed.), Series on Biological and Medical Physics, Biomedical Engineering, Springer, 2011.

Conference Papers

 

M Murgasova, G Quaghebeur, J Hajnal, JA Schnabel.
Unified framework for superresolution reconstruction of 3D fetal brain MR images from 2D slices with intensity correction and outlier rejection.
Proc. MICCAI Workshop on Image Analysis of Human Brain Development (IAHBD), 2011.

L Risser, H Baluwala, JA Schnabel.
Diffeomorphic registration with sliding conditions: Application to the registration of lungs CT lungs.
Proc. MICCAI Workshop on Pulmonary Image Analysis (PIA), 2011.

L Risser, MP Heinrich, D Rueckert, JA Schnabel.
Multi-modal diffeomorphic registration using mutual information: Application to the registration of CT and MR pulmonary images.
Proc. MICCAI Workshop on Pulmonary Image Analysis (PIA), 2011.

M Bhushan, JA Schnabel, MP Heinrich, L Risser, JM Brady, M Jenkinson.
Motion correction and parameter estimation in dceMRI sequences: Application to colorectal cancer.
Proc. Medical Imaging and Computer Assisted Interventions (MICCAI), 2011.

MP Heinrich, M Jenkinson, M Bhushan, T Matin, F Gleeson, JM Brady, JA Schnabel.
Non-local shape descriptor: A new similarity metric for deformable multimodal registration.
Proc. Medical Imaging and Computer Assisted Interventions (MICCAI), 2011.

IJA Simpson, MW Woolrich, JA Schnabel.
Longitudinal brain MRI analysis with uncertain registration.
Proc. Medical Imaging and Computer Assisted Interventions (MICCAI), 2011.

J Bozek, M Grgic, JA Schnabel.
Mammographic images validation of rigid registration of mammographic images.
Proc. 53rd International Symposium ELMAR-2011.

MP Heinrich, M Jenkinson, JM Brady, JA Schnabel.
Non-rigid image registration through efficient discrete optimization.
Proc. Medical Image Analysis and Understanding (MIUA), 2011.

IJA Simpson, MW Woolrich, JA Schnabel.
Probabilistic segmentation propagation from uncertainty in registration.
Proc. Medical Image Analysis and Understanding (MIUA), 2011.

Z Wu, M Murgasova, A Buchmann, M von Rhein, JA Schnabel.
Brain extraction methods for neonates.
Proc. Medical Image Analysis and Understanding (MIUA), 2011.

G Flaccavento, V Lempitsky, I Pope, PR Barber, A Zisserman, JA Noble, B Vojnovic.
Learning to Count Cells: applications to lens-free imaging of large fields.
Proc. International Workshop on Microscopic image analysis with applications in Biology – Heidelberg, 2011.

C Buehnemann, H Yu, S Li, HA Branford White, JA Noble, AB Hassan.
Unbiased digital image based quantification of IGF pathway signaling responses in Ewing’s sarcoma of bone.
Proc. International Workshop on Microscopic image analysis with applications in Biology – Heidelberg, 2011.

A di Battista, R English, JA Noble.
Ultrasound viscoelastic Imaging of breast lesions: a practical hybrid freehand technique for data acquisition.
Proc. ASME 2011 International Mechanical Engineering Congress & Exposition (IMECE) 11-17 Nov 2011.

M Verhoek, M Yaqub, J Mcmanigle, JA Noble.
Learning optical flow propagation strategies using random forests for fast segmentation in dynamic 2D and 3D echocardiography.
Proc. International Workshop on Machine Learning in Medical Imaging (MLMI), Toronto, 18 Sept 2011.

B Rahmatullah, A Papageorghiou, JA Noble.
Automated selection of standardized planes from ultrasound volumes.
Proc. International Workshop on Machine Learning in Medical Imaging (MLMI), Toronto, 18 Sept 2011.

M Yaqub, K Javaid, C Cooper, JA Noble.
Improving the classification accuracy of the classic RF method by intelligent feature selection and weighted voting of trees with application to medical image segmentation.
Proc. International Workshop on Machine Learning in Medical Imaging (MLMI ), Toronto, 18 Sept 2011.

K Rajpoot, D Augustine, C Basagiannis, JA Noble, H Becher, P Leeson.
3D fusion echocardiography improves transoeosphageal LV assessment.
Proc. International Conference on Functional Imaging and Modeling of the Heart, LNCS 6666:161-162, 2011.

S Rueda, C Knight, A Papageorghiou, JA Noble.
Local Phase-Based Fuzzy Connectedness Segmentation of Ultrasound Images.
Proc. Medical Image Understanding and Analysis (MIUA), pp 331-335, London, UK, July 2011.

G Pons, J Martí, R Marti, A Noble.
Simultaneous Lesion Segmentation and Bias Correction in Breast Ultrasound Images.
Proc. Iberian Conference on Pattern Recognition and Image Analysis, 8-10 June, Spain. LNCS 6669:692-699, 2011.

K Allen, N Joshi, JA Noble.
Tramline and NP windows estimation for enhanced unsupervised retinal vessel segmentation.
Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), pp 1387-1390, 30 March-2 April, 2011.

H Baluwala, KA Saddi, JA Schnabel.
Elastic registration of chest CT images with log-unbiased deformations and rigidity constraint.
Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), pp 1235-1238, 30 March-2 April, 2011.

JW Chi, JM Brady, NR Moore, JA Schnabel.
Fusion of perpendicular anisotropic MRI sequences.
Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), pp 1455-1458, 30 March-2 April, 2011.

JW Chi, JM Brady, NR Moore, JA Schnabel.
Segmentation of the bladder wall using coupled level set methods.
Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), pp 1653-1656, 30 March-2 April, 2011.

K Chykeyuk, D Clifton, JA Noble.
Feature extraction and wall motion classification of 2D stress echocardiography with relevance vector machines.
Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), pp 677-680, 30 March-2 April, 2011.

A di Battista, JA Noble.
A fast and robust 3D ultrasound strain inaging method for freehand scanning.
Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), pp 528-531, 30 March-2 April, 2011.

A Larrue, JA Noble.
Nakagami imaging with small windows.
Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), pp 897-890, 30 March-2 April, 2011.

S Li, JG Wakefield, JA Noble.
Automated segmentation and alignment of mitotic nuclei for kymograph visualization.
Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), pp 622-625, 30 March-2 April, 2011.

S Li, C Buehnemann, B Hassan, JA Noble.
Segmentation of cell clumps for quantitative analysis.
Proc. of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), pp 4813-4816, 2011.

B Rahmatullah, I Sarris, A Papageorghiou, JA Noble.
Quality control of fetal ultrasound images: detection of abdomen anatomical landmarks using AdaBoost.
Proc. IEEE International Symposium on Biomedical Imaging (ISBI), pp 6-9, 30 March-2 April, 2011.

K Chykeyuk, DA Clifton, JA Noble.
Feature extraction and wall motion classification of 2D stress echocardiography with support vector machines.
Proc. IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), pp 677-680, 30 March-2 April 2011.

G Stevenson, SL Collins, L Impey, JA Noble.
Surface parameterization of the utero/placental interface using 3D power Doppler ultrasound.
Proc. IEEE International Symposium on Biomedical Imaging (ISBI), pp 891-894, 30 March-2 April, 2011.

S Fathima, S Rueda, A Papageorghiou, JA Noble.
A novel local-phase method of automatic atlas construction in fetal ultrasound.
Proc. SPIE Medical Imaging, 14 February 2011, Lake Buena Vista, Florida, USA, p 7962, 79621A.

Conference Abstracts

WE Moroski, MJ Rijken, R McGready, G Stevenson, A Noble, S Kennedy, AT Papageorghiou, F Nosten.
Placental volume in malaria infected pregnancies.
Proc. 21st World Congress on Ultrasound in Obstetrics and Gynecology, 18-22 Sept 2011.

B Rahmatullah, I Sarris, AT Papageorghiou, JA Noble.
Automated image scoring for quality control purposes of fetal measurements in the context of multicenter studies: abdominal circumference.
Proc. 21st World Congress on Ultrasound in Obstetrics and Gynecology, 18-22 Sept 2011.

SL Collins,  G Stevenson, A Noble, LW Impey, AW Welsh.
The need to standardize Virtual Organ Computer-aided AnaLysis (VOCAL) power Doppler indices to the syb-bloom gain (SBG) level.
Proc. 21st World Congress on Ultrasound in Obstetrics and Gynecology, 18-22 Sept 2011.

SL Collins,  G Stevenson, A Noble, LW Impey.
Size is everything: searching for an early ultrasound marker which predicts the term small for gestational age (SGA) baby.
Proc. IFPA, Norway, 14-17 Sept 2011.