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2012

Journal Articles

 

SL Collins, G Stevenson, J A Noble, L Impey.
Developmental changes in spiral artery blood flow in the human placenta observed with colour Doppler ultrasonography.
Placenta 2012 Oct;33(10):782-7.
http://dx.doi.org/10.1016/j.placenta.2012.07.005.

AW Welsh, SL Collins, GN Stevenson, JA Noble, L Impey
Inapplicability of the Fractional Moving Blood Volume (FMBV) technique to standardise VOCAL indices for quantified power Doppler
Ultrasound in Obstetrics & Gynecology, (UOG), Dec 2012;40(6):688-92.
http://dx.doi.org/10.1002/uog.11139.

L Risser, F-X Vialard, HY Baluwala, JA Schnabel.
Piecewise-diffeomorphic image registration: Application to the motion correction of 3D CT lung images using sliding conditions.
Medical Image Analysis, in Press. Available online 2 November 2012
http://dx.doi.org/10.1016/j.media.2012.10.001.

P Orlowski, P Summers, JA Noble, JV Byrne,Y Ventikos.
Computational modelling of the embolization of brain arteriovenous malformations.
Medical Engineering and Physics 2011. Published 2012 Sep;34(7):873-81.
http://dx.doi.org/10.1016/j.medengphy.2011.09.028.

C Ioannou, M K Javaid, P Mahon, M Yaqub, NC Harvey, KM Godfrey, JA Noble, C Cooper, AT Papageorghiou.
The effect of maternal vitamin D concentration on fetal bone.
Journal of Clinical Endocrinology & Metabolism Nov 2012;97(11):E2070-7.
http://dx.doi.org/10.1210/jc.2012-2538. Epub 2012 Sep 18.

M Kuklisova-Murgasova, G Quaghebeur, MA Rutherford, JV Hajnal, JA Schanbel.
Reconstruction of fetal brain MRI with intensity matching and complete outlier removal.
Medical Image Analysis, 16 Dec 2012(8):1550-64.
http://dx.doi.org/10.1016/j.media.2012.07.004. Epub 2012 Aug 9.

SL Collins, G Stevenson, JA Noble, L Impey, AW Welsh.
Influence of power Doppler gain setting on Virtual Organ Computer AnaLysis (VOCAL) indices in vivo: can use of the individual sub-noise gain (SNG) level optimise information?
Ultrasound in Obstetrics & Gynecology, July 2012;40(1):75-80.
http://dx.doi.org/10.1002/uog.10122.

E Santos Filho, JA Noble, M Poli, T Griffiths, G Emerson, and D Wells.
A method for semi-automatic grading of human blastocyst microscope images.
Human Reproduction. Sept 2012;27(9):2641-8.
http://dx.doi.org/10.1093/humrep/des219. Epub 2012 Jun 26.

MP Heinrich, M Jenkinson, M Bhushan, T Matin, FV Gleeson, Sir JM Brady, JA Schnabel.
MIND: Modality Independent Neighbourhood Descriptor for multi-modal deformable registration.
Medical Image Analysis - Special Issue MICCAI 2011.
http://dx.doi.org/10.1016/j.media.2012.05.008

MJ Rijken, WE Moroski, S Kiricharoen, N Karunkonkowit, G Stevenson, E Ohuma, JA Noble, SH Kennedy, R McGready, A Papageorghiou and FH Nosten
Effect of malaria on placental volume measured using three-dimensional ultrasound: a pilot study.
Malaria Journal, 2012 vol.11(5)
http://dx.doi.org/10.1186/1475-2875-11-5

C Wessel, JA Schnabel, JM Brady.
Towards a more realistic biomechanical modelling of breast malignant tumours.
Physics in Medicine and Biology vol. 57 (2012) 631-648.
http://dx.doi.org/10.1088/0031-9155/57/3/631

IJA Simpson, JA Schnabel, AR Groves, JL Andersson, MW Woolrich.
Probabilistic inference of regularisation in non-rigid registration.
NeuroImage, 2012 vol.59(3), pp 2438–2451.

David J Gavaghan, Vicente Grau, Peter Kohl, Martin J Bishop, Gernot Plank, Rebecca AB Burton, Jürgen E Schneider - Development of an anatomically detailed MRI-derived. Europace 2012/11  14 (5) Pages v82-v89

Boguslaw Obara, Vicente Grau, Mark D Fricker - A bioimage informatics approach to automatically extract complex fungal networks Bioinformatics 2012/9/15 28 (18) 2374-2381

Conference Papers

 

K. Chykeyuk, M. Yaqub, J. A. Noble (2013). Novel Context Rich LoCo and GloCo Features with Local and Global Shape Constraints for Segmentation of 3D Echocardiograms with Random Forests. Medical Computer Vision. Recognition Techniques and Applications in Medical Imaging. B. Menze, G. Langs, L. Luet al, Springer Berlin Heidelberg. 7766: 59-69.

EJ Hill, J Franklin, M Enescu, T Pwint, JA Schnabel, EM Anderson, G Brown, WG McKenna, T Maughan and RA Sharma.
Phase 0-I clinical trial of nelfinavir with hypofractionated radiotherapy for rectal cancer: Clinical safety and changes in tumour perfusion observed.
The National Cancer Research Institute (NCRI) 2012.

J Jiao, G Searle, A Tziortzi, C Salinas, R Gunn, JA Schnabel.
Spatial-temporal pharmacokinetic model based registration of 4D brain PET data.
Proceedings of the 2nd International MICCAI Workshop on Spatiotemporal Image Analysis for Longitudinal and Time-Series Image Data (STIA'12), 2012.

S Wang, M Kuklisova-Murgasova, JA Schnabel.
An atlas-based method for neonatal MR brain tissue segmentation.
Proceedings of the MICCAI Grand Challenge: Neonatal Brain Segmentation (NeoBrainS12), 2012.

S. Rueda, C. Knight, A.T. Papageorghiou, J.A. Noble
Ultrasound-Based Fetal Arm Adipose Tissue Thickness Quantification Across Gestation.
Proceedings of the MICCAI Workshop on Perinatal and Paediatric Imaging: PaPI 2012, 1st October 2012, Nice, France.

A. Ciurte, S. Rueda, X. Bresson, S. Nedevschi, A.T. Papageorghiou, J.A. Noble, M. Bach Cuadra.
Ultrasound Image Segmentation of the Fetal Abdomen: a Semi-Supervised Patch-Based Approach.
Proceedings of the MICCAI Workshop on Perinatal and Paediatric Imaging: PaPI 2012, 1st October 2012, Nice, France.

PG Brown, J Alsousou, M Thompson, JA Noble
Ultrasound strain imaging measurement in achilles tendons as a measure of healing from rupture with controlled ankle motion.
The 18th Congress of the Biomechanics (ESB), 1-4 July 2012,  Lisbon, Portugal, to appear.

B Rahmatullah, A Papageorghiou, JA Noble.
Image analysis using machine learning: anatomical landmark detection in fetal ultrasound images.
Proceedings of the Annual Computer Software and Applications Conference (COMPSAC), IEEE, 16-20 July 2012, Izmir, Turkey.

R Riberio, R English, JA Noble.
Improving breast mass visibility in ultrasound images using spectral analysis and contrast enhancement algorithms.
Proceedings of the international conference on Imaging and Signal Processing in Health Care and Technology (ISPHT), IASTED, 14-16 May 2012, Baltimore, USA.

B Rahmatullah, A Papageorghiou, JA Noble.
Integration of local and global features for anatomical object detection in ultrasound.
Proceedings of the Medical Imaging and Computer Assisted Interventions (MICCAI), 1-5 October 2012, Nice, France.

C Arteta, V Lempitsky, JA Noble, A Zisserman.
Learning Non-overlapping Extremal Regions To Detect Cells
Proceedings of the Medical Imaging and Computer Assisted Interventions (MICCAI), 1-5 October 2012, Nice, France.

M Kuklisova-Murgasova, A Cifor, R Napolitano, A Papageorghiou, G Quaghebeur, JA Noble, JA Schnabel.
Registration of 3D fetal brain US and MRI.
Proceedings of the Medical Imaging and Computer Assisted Interventions (MICCAI), 1-5 October 2012, Nice, France.

MP Heinrich, M Jenkinson,  Sir JM Brady, JA Schnabel.
Globally Optimal Deformable Registration on a Minimum Spanning Tree using Dense Displacement Sampling.
Proceedings of the Medical Imaging and Computer Assisted Interventions (MICCAI), 1-5 October 2012, Nice, France.

B Rahmatullah, A Papageorghiou, JA Noble.
Multi-scale local phase features for anatomical object detection in fetal ultrasound images.
Proceedings of the Medical Image Understanding and Analysis (MIUA), 9-11 July 2012, Swansea, UK.

A Namburete, B Rahmatullah, JA Noble.
Nakagami-based choroid plexus detection in fetal ultrasound images using AdaBoost.
Proceedings of the Medical Image Understanding and Analysis (MIUA), 9-11 July 2012, Swansea, UK.

IJA Simpson, JA Schnabel, JLR Andersson, AR Groves, MW Woolrich.
Ensemble learning incorporating uncertain registration.
Proceedings of the Medical Image Understanding and Analysis (MIUA), 9-11 July 2012, Swansea, UK.

MP Heinrich, M Jenkinson, Sir JM Brady, JA Schnabel.
Robust super-resolution reconstruction with multi-modal registration and guidance.
Proceedings of the Medical Image Understanding and Analysis (MIUA), 9-11 July 2012, Swansea, UK.

JA Noble
Image analysis of the human fetus and newborn – developing new clinical tools for perinatal care.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, Spain. pp. 490-492.

PG Brown , J Alsousou, M Thompson, JA Noble
Controlled motion strain measurement using lateral speckle tracking in achilles tendons during healing.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, Spain. pp. 1104-1107.

JE McManigle, RV Stebbing, JA Noble
Modified Hough transform for left ventricle myocardium segmentation in 3-d echocardiogram images.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, pp. 290-293.

RV Stebbing, JE McManigle, JA Noble.
Interpreting edge information for improved endocardium delineation in echocardiograms.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, Spain, pp. 238-241.

S Rueda, C Knight, A Papageorghiou, JA Noble.
Regularised Feature-Based Fuzzy Connectedness Segmentation of Ultrasound Images for Fetal Soft Tissue Quantification Across Gestation.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, Spain, pp. 1323-1326.

M Yaqub, R Napolitano, C Ioannou, AT Papageorghiou, JA Noble.
Automatic detection of local fetal brain structures in ultrasound images.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, Spain. pp. 1555-1558.

A Cifor, L Risser, D Chung, EM Anderson, JA Schnabel.
Hybrid feature-based log-demons registration for tumour tracking in 2-D liver ultrasound images.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, Spain. pp. 724-727.

MP Heinrich, M Jenkinson, Sir JM Brady, JA Schnabel.
Textural mutual information based on cluster trees for multimodal deformable registration.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, Spain. pp.1471-1474.

M Kuklisova-Murgasova, G Quaghebeur, JV Hajnal, JA Noble, JA Schnabel
Towards registration of fetal brain MR and ultrasound.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, Spain. pp. 346-349.

L Risser, MP Heinrich, JA Schnabel.
Piecewise-diffeomorphic registration of 3D CT/MR pulmonary images with sliding conditions.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, Spain. pp. 1351-1354.

IJA Simpson, JA Schnabel, JL Andersson, AR Groves, MW Woolrich.
A probabilistic non-rigid registration framework with local noise estimates.
Proceedings of the International Symposium on Biomedical Imaging (ISBI) - IEEE, 2 - 5 May 2012, Barcelona, Spain. pp. 688-691.

M Bhushan, JA Schnabel, L Tanner, F Gleeson, Sir JM Brady, M Jenkinson.
Simultaneous Bayesian Estimation of Motion and Pharmacokinetic Parameters in Dynamic Contrast-Enhanced MRI for the Discrimination of Responders in Colorectal Cancer.
Proceedings of the International Society for Magnetic Resonance in Medicine, 5-11 May 2012, Melbourne, Australia.

LN Tanner, CJ Kelly, JA Schnabel, Sir JM Brady
Combined pharmacokinetic modelling of dPET and DCE-MRI for improved tumour tissue characterisation
Proceedings of the Molecular Imaging in Radiation Oncology (MIRO), Vienna, Austria, 29-31 March 2012.

Conference Abstracts


D.Y. Chung, A. Larrue, S. Rueda, P. Boardman, F.V. Gleeson, E.M. Anderson Preliminary Study of Factors Influencing the Shape of Microwave Hepatic Tumor Ablation Zone With a 2.45-GHz Antenna in Vivo. Radiological Society of North America (RSNA) 2012.

GN Stevenson, SL Collins, AW Welsh, LW Impey, JA Noble An image processing technique for 3‐D fractional moving blood volume (FMBV) estimation using power Doppler ultrasound (PD‐US) Ultrasound in Obstetrics & Gynecology World Congress Copenhagen, Aug. 2012.

CL Knight, S Rueda, JA Noble, AT Papageorghiou Fetal arm fat: development throughout pregnancy in selectively screened optimally healthy patients. Proceedings of the 22nd World Congress on Ultrasound in Obstetrics and Gynecology 2012 (ISUOG), 9-12 September 2012, Copenhagen, Denmark.

CL Knight, S Rueda, JA Noble, AT Papageorghiou Fetal arm fat: an in utero marker of body composition? Proceedings of the 22nd World Congress on Ultrasound in Obstetrics and Gynecology 2012 (ISUOG), 9-12 September 2012, Copenhagen, Denmark.

R Napolitano, M Yaqub, C Ioannou, CL Knight, JA Noble, AT Papageorghiou. An image processing technique for 3-D fractional moving blood volume (FMBV) estimation using power Doppler ultrasound (PD-US). Proceedings of the 22nd World Congress on Ultrasound in Obstetrics and Gynecology 2012 (ISUOG), 9-12 September 2012, Copenhagen, Denmark.

M Ahmed, S Rueda, CL Knight, AT Papageorghiou, JA Noble Assessing fetal fractional arm adipose tissue volume using 3D ultrasound: the importance of measuring perpendicular to the humerus. Proceedings of the 22nd World Congress on Ultrasound in Obstetrics and Gynecology 2012 (ISUOG), 9-12 September 2012, Copenhagen, Denmark.

S Rueda, CL Knight, AT Papageorghiou, JA Noble Novel automatic method for measuring fetal arm adipose tissue in 2D ultrasound images across gestation. Proceedings of the 22nd World Congress on Ultrasound in Obstetrics and Gynecology 2012 (ISUOG), 9-12 September 2012, Copenhagen, Denmark.

B Rahmatullah, I Sarris, C Ioannou, CL Knight, JA Noble, AT Papageorghiou Automated fetal biometry image landmark detection for confirming correct image planes: abdominal circumference. Proceedings of the 22nd World Congress on Ultrasound in Obstetrics and Gynecology 2012 (ISUOG), 9-12 September 2012, Copenhagen, Denmark.

SL Collins, GN Stevenson, A Welsh, JA Noble, L Impey. Utero-placental interface vascularity in early pregnancy estimated by 3-D fractional moving blood volume (3-D FMBV) predicts fetal growth restriction. Proceedings of the 22nd World Congress on Ultrasound in Obstetrics and Gynecology 2012 (ISUOG), 9-12 September 2012, Copenhagen, Denmark.

M Kuklisova-Murgasova, G Quaghebeur, JA Schnabel.
3D Reconstruction of fetal brain MRI.
American Society of Neuro-radiology 50th Annual Meeting, New York, 2012.

J Jiao, CA Salinas, RN Gunn, JA Schnabel.
Image registration of dynamic PET data using an EM framework that incorporates tracer kinetic information.
Proceeding of the The International Society for Optical Engineering, 16-20 April 2012, Brussells, Belgium.

Boguslaw Obara, Mark Fricker, Vicente Grau - Coherence enhancing diffusion filtering based on the Phase Congruency Tensor - Biomedical Imaging (ISBI), 2012 9th IEEE International Symposium on 2012/5/2 p 202-205  IEEE

Tom Doel, Tahreema N Matin, Fergus V Gleeson, David J Gavaghan, Vicente Grau - Pulmonary lobe segmentation from CT images using fissureness, airways, vessels and multilevel B-splines 2012/5/2 - Biomedical Imaging (ISBI), 2012 9th IEEE International Symposium on p 1491-1494 - IEEE