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Publications

Books

Chappell, M.A. and Payne, S.J. Physiology for Engineers. Springer, 2016.

Payne, S.J. Cerebral Autoregulation. Springer, 2016.

Journal papers and letters

In press

[71] El-Bouri, W.K. and Payne, S.J. A statistical model of the penetrating arterioles and venules in the human cerebral cortex. Microcirculation, in press.

[70] Park, C.S., Hall, S.K., Liu, C. and Payne, S.J. A model of tissue contraction during thermal ablation. Physiological Measurement, in press.

[69] Mokhtarudin, M.J.M. and Payne, S.J. The study of the function of AQP4 in cerebral ischemia-reperfusion injury using poroelastic theory. International Journal for Numerical Methods in Biomedical Engineering, in press.

2016

[68] Park, C.S. and Payne, S.J. Modelling the effects of cerebral microvasculature morphology on oxygen transport. Medical Engineering and Physics, 38: 41-47, 2016.

2015

[67] Hall, S.K., Ooi, E.H. and Payne, S.J. Cell death, perfusion and electrical parameters are critical in models of hepatic radio frequency ablation. International Journal of Hyperthermia, 31: 538-550, 2015.

[66] El-Bouri, W.K. and Payne, S.J. Multi-scale homogenization of blood flow in 3-dimensional human cerebral microvascular networks. Journal of Theoretical Biology, 380: 40-47, 2015.

[65] Mokhtarudin, M.J.M. and Payne, S.J. Mathematical model of the effect of ischemia-reperfusion on brain capillary collapse and tissue swelling. Mathematical Biosciences, 263: 111-120, 2015. 

[64] Harston, G.W.J., Tee, Y.K., Blockley, N., Okell, T.W., Thandeswaran, S., Shaya, G., Sheerin, F., Cellerini, M., Payne, S.J., Jezzard, P., Chappell, M.A. and Kennedy, J. Identifying the ischaemic penumbra using pH-weighted magnetic resonance imaging. Brain, 138: 36-42, 2015.

[63] Oster, J., Llinares, R., Payne, S.J., Tse, Z.T.H., Schmidt, E.J. and Clifford, G.D. Comparison of three artificial models of the magnetohydrodynamic effect on the electrocardiogram. Computer Methods in Biomechanics and Biomedical Engineering, 18:1400-1417, 2015.

2014

[62] Hall, S.K., Ooi, E.H. and Payne, S.J. A mathematical framework for minimally invasive cancer treatments. Critical Reviews in Biomedical Engineering, 42: 383-417, 2014.

[61] Mehndiratta, A., Calamante, F., MacIntosh, B.J., Crane, D.E., Payne, S.J. and Chappell, M.A. Modelling and correction of bolus dispersion effects in DSC-MRI. Magnetic Resonance in Medicine, 72: 1762-1774, 2014.

[60] Mehndiratta, A., Calamante, F., MacIntosh, B.J., Crane, D.E., Payne, S.J. and Chappell, M.A. Modelling the residue function in DSC-MRI simulations: analytical approximation to in vivo data. Magnetic Resonance in Medicine, 72: 1486-1491, 2014.

[59] Tee, Y.K., Donahue, M.J., Harston, G.W.J., Payne, S.J. and Chappell, M.A. Quantification of Amide Proton Transfer effect pre- and post-Gadolinium contrast agent administration. Journal of Magnetic Resonance Imaging, 40: 832-838, 2014.

[58] Tee, Y.K., Harston, G. W.J., Blockley, N., Okell, T.W., Levman, J., Sheerin, F., Cellerini, M., Jezzard, P., Kennedy, J., Payne, S. J. and Chappell, M. A. Comparing different analysis methods for quantifying the MRI Amide Proton Transfer (APT) effect in hyperacute stroke patients. NMR in Biomedicine, 27: 1019-1029, 2014.

[57] van den Abeelen, A.S.S., ... Payne, S.J., ... and Claassen, J.A.H.R. Between-centre variability in transfer function analysis, a widely used method for linear quantification of the dynamic pressure-flow relation: The CARNet study. Medical Engineering and Physics, 36: 620-627, 2014.

[56] Georgieva, A., Papageorghiou, A., Payne, S.J., Moulden, M. and Redman, C.W.G. Phase rectified signal averaging for intrapartum electronic fetal heart rate monitoring predicts acidaemia at birth. British Journal of Obstetrics and Gynaecology, 121: 889-894, 2014.

[55] Xu, L., Redman, C.W.G., Payne, S.J. and Georgieva, A. Feature selection using genetic algorithms for fetal heart rate analysis. Physiological Measurement, 35: 1357-1371, 2014.

[54] Orlowski, P., Kennedy McConnell, F. and Payne, S.J. A mathematical model of cellular metabolism during ischemic stroke and hypothermia. IEEE Transactions on Biomedical Engineering, 61: 484-490, 2014.

2013

[53] Harston, G.W.J., Tee, Y.K., Jones, M., Payne, S.J., Pope, G., Sheerin, F. and Kennedy, J. Ventricular extension of intracerebral hemorrhage during intravenous thrombolysis. Cerebrovascular Diseases, 36: 324-325, 2013.

[52] Tee, Y.K., Khrapitchev, A.A., Sibson, N.R., Payne, S.J. and Chappell, M.A. Optimal Sampling Schedule for Chemical Exchange Saturation Transfer (CEST). Magnetic Resonance in Medicine, 70: 1251-1262, 2013.

[51] Chappell, M.A., Donahue, M.J., Tee, Y.K., Krapitchev, A.A., Sibson, N.R., Jezzard, P.J. and Payne, S.J. Quantitative Bayesian model-based analysis of Amide Proton Transfer MRI. Magnetic Resonance in Medicine, 70: 556-567, 2013.

[50] Orlowski, P., O'Neill, D.P., Grau, V., Ventikos, Y. and Payne, S.J. Modelling of the physiological response of the brain to ischaemic stroke. Interface Focus, 3 2 20120079, 2013.

[49] Park, C.S. and Payne, S.J. A generalised mathematical framework for estimating the residue function for arbitrary vascular networks. Interface Focus, 3 2 20120078, 2013.

[48] Peng, T., Niazy, R., Payne, S.J. and Wise, R.G. The effects of respiratory CO2 fluctuations in the resting-state BOLD signal differ between eyes open and eyes closed. Magnetic Resonance Imaging, 31: 336-345, 2013.

[47] Chappell, M.A., Woolrich, M.W., Petersen, E., Golay, X. and Payne, S.J. Comparing model-based and model-free analysis methods for QUASAR arterial spin labelling perfusion quantification. Magnetic Resonance in Medicine, 69: 1466-1475, 2013.

[46] Chappell, M.A., Woolrich, M.W., Kazan, S.M., Jezzard,P., Payne, S.J. and MacIntosh, B.J. Modeling dispersion in arterial spin labelling: Validation using dynamic angiographic measurements. Magnetic Resonance in Medicine, 69: 563-570, 2013.

[45] Georgieva, A., Payne, S.J., Moulden, M. and Redman, C.W.G. Artificial neural networks applied to fetal monitoring in labour. Neural Computing and Applications, 22: 85-93, 2013.

[44] Mehndiratta, A., MacIntosh, B.J., Crane, D.E., Payne, S.J. and Chappell, M.A. A control point interpolation method for the non-parametric quantification of cerebral haemodynamics from Dynamic Susceptibility Contrast MRI. NeuroImage, 64: 560-570, 2013.

2012

[43] Phillip, D., Schytz, H.W., Selb, J., Payne, S.J., Iversen, H.K., Skovgaard, L.T., Boas, D.A. and Ashina, M. Low frequency oscillations in cephalic vessels assessed by near infrared spectroscopy. European Journal of Clinical Investigation, 42: 1180-1188, 2012.

[42] Tee, Y.K., Khrapitchev, A.A., Sibson, N.R., Payne, S.J. and Chappell, M.A. Evaluating the use of a continuous approximation for model-based quantification of pulsed Chemical Exchange Saturation Transfer (CEST). Journal of Magnetic Resonance, 222: 88-95, 2012.

[41] Chappell, M.A., Okell, T., Payne, S.J., Jezzard, P. and Woolrich, M.W. A fast analysis method for non-invasive imaging of blood flow in individual cerebral arteries using vessel-encoded arterial spin labeling angiography. Medical Image Analysis, 16: 831-839, 2012.

[40] Georgieva, A., Payne, S.J., Moulden, M. and Redman, C.W.G. Relation of fetal heart rate signals with unassignable baseline to poor neonatal state at birth. Medical and Biological Engineering and Computing, 50: 717-725, 2012.

[39] Payne, S.J., Oakes, C.N. and Park, C.S. Vasomotion does inhibit mass exchange between axisymmetric blood vessels and tissue. Journal of Theoretical Biology, 302: 1-5, 2012.

[38] Su, S.W., Catherall, M.G.F. and Payne, S.J. The influence of network structure on the transport of blood in the human cerebral microvasculature. Microcirculation, 19: 175-187, 2012.

2011

[37] Webb, I.R., Payne, S.J. and Coussios, C.-C. Effect of temperature on rectified diffusion during ultrasound-induced heating. Journal of the Acoustical Society of America, 130: 3450-3457, 2011.

[36] Webb, I.R., Payne, S.J. and Coussios, C.-C. The effect of temperature and viscoelasticity on cavitation dynamics during ultrasonic ablation. Journal of the Acoustical Society of America, 130: 3458-3466, 2011.

[35] Payne, S.J., Flanagan, R., Pollari, M., Alhonnoro, T., O'Neill, D.P., Peng, T. and Steigler, P. Image-based multi-scale modelling and validation of radio frequency ablation in liver tumours. Philosophical Transactions of the Royal Society A, 369: 4233-4254, 2011.

[34] Georgieva, A., Moulden, M., Payne, S.J. and Redman, C.W.G. Computerized fetal heart rate analysis in labor: detection of intervals with un-assingable baseline, Physiological Measurement, 32: 1549-1560, 2011.

[33] Orlowski, P., Chappell, M.A., Park, C.S., Grau, V. and Payne, S.J. Modelling of pH dynamics in brain cells after stroke. Interface Focus (formerly Journal of the Royal Society Interface), 1: 408-416, 2011.

[32] Payne, S.J., Mohammad, J., Tisdall, M.M. and Tachtsidis, I. The effects of arterial blood gas levels on cerebral blood flow and oxygen transport. Biomedical Optics Express, 2: 966-979, 2011.

[31] Peng, T., O'Neill, D.P. and Payne, S.J. A two-equation coupled system for determination of liver tissue temperature during thermal ablation. International Journal of Heat and Mass Transfer, 54: 2100-2109, 2011.

[30] Park, C.S. and Payne, S.J. Nonlinear and viscous effects on wave propagation in an elastic axi-symmetric vessel. Journal of Fluids and Structures, 27: 134-144, 2011.

[29] O'Neill, D.P., Peng. T., Stiegler, P., Mayrhauser, U., Koestenbauer, S., Tscheliessnigg, K. and Payne, S.J. A three-state mathematical model of hyperthermic cell death. Annals of Biomedical Engineering, 39: 570-579, 2011.

2010

[28] Webb, I.R., Arora, M., Roy, R.A., Payne, S.J. and Coussios, C.-C. Dynamics of gas bubbles in time-variant temperature fields. Journal of Fluid Mechanics, 663: 209-232, 2010.

[27] Payne, S.J., Peng, T. and O'Neill, D.P. Mathematical modelling of thermal ablation. Critical Reviews in Biomedical Engineering, 38: 21-30, 2010.

[26] Peng, T., Rowley, A.B., Ainslie, P.N., Poulin, M.J. and Payne, S.J. Wavelet phase synchronization analysis of cerebral blood flow autoregulation. IEEE Transactions on Biomedical Engineering, 57: 960-968, 2010.

[25] Hapuarachchi, T., Park, C.S. and Payne, S.J. Quantification of the effects of vasomotion on mass transport to tissue from axisymmetric blood vessels. Journal of Theoretical Biology, 264: 553-559, 2010.

[24] Kazan, S.M., Chappell, M.A. and Payne, S.J. Modelling the effects of cardiac pulsations in arterial spin labeling. Physics in Medicine and Biology, 55: 799-816, 2010.

2009

[23] Georgieva, A., Payne, S.J. and Redman, C.W.G. Computerised electronic foetal monitoring in labour: automated contraction identification. Medical and Biological Engineering and Computing, 47: 1315-1320, 2009.

[22] Payne, S.J., Selb, J. and Boas, D.A. Effects of autoregulation and CO2 reactivity on cerebral oxygen transport. Annals of Biomedical Engineering, 37: 2288-2298, 2009.

[21] Boas, D.A. and Payne, S.J.. Comment on ‘Estimating a modified Grubb’s exponent in healthy human brains with near infrared spectroscopy and transcranial Doppler’. Physiological Measurement, 30: L9-L11, 2009.

[20] Kazan, S.M., Chappell, M.A. and Payne, S.J. Modelling the effects of flow dispersion in Arterial Spin Labelling. IEEE Transactions on Biomedical Engineering, 56: 1635-1643, 2009.

2008

[19] Peng, T., Ainslie, P.N., Cotter, J.D., Murrell, C., Thomas, K., Williams, M.J.A., George, K., Shave, R., Rowley, A.B. and Payne, S.J.The effects of age on the spontaneous low-frequency oscillations in cerebral and systemic cardiovascular dynamics. Physiological Measurement, 29: 1055-1069, 2008.

[18] Peng, T., Rowley, A.B., Ainslie, P.N., Poulin, M.J. and Payne, S.J. Multivariate system identification for cerebral autoregulation. Annals of Biomedical Engineering 36: 308-320, 2008.

2007

[17] Chappell, M.A., Uzel, S. and Payne, S.J. Modelling the detachment and transport of bubbles from nucleation sites in small vessels. IEEE Transactions on Biomedical Engineering, 54: 2106-2108, 2007.

[16] Payne, S.J. and Moxon, A.J.W. High frequency effects in the aspirating probe. Journal of Turbomachinery, 129: 842-851, 2007.

[15] Chappell, M.A. and Payne, S.J. The effect of cavity geometry on the nucleation of bubbles from cavities. Journal of the Acoustical Society of America, 121: 853-862, 2007.

[14] Rowley, A.B., Payne, S.J., Tachtsidis, I., Ebden, M.J., Whiteley, J.P., Gavaghan, D.J., Tarassenko, L., Smith, M., Elwell, C.E. and Delpy, D.T. Synchronization between arterial blood pressure and cerebral oxyhaemoglobin concentration investigated by wavelet cross-correlation. Physiological Measurement, 28: 161-173, 2007.

2006

[13] Payne, S.J. A model of the interaction between autoregulation and neural activation in the brain. Mathematical Biosciences, 204: 260-281, 2006. N.B. Please note Erratum (219: 56, 2009).

[12] Chappell, M.A. and Payne, S.J. A physiological model of the release of gas bubbles from crevices under decompression. Respiration Physiology and Neurobiology, 153: 166-180, 2006.

[11] Payne, S.J. and Tarassenko, L. Combined transfer function analysis and modelling of cerebral autoregulation. Annals of Biomedical Engineering, 34: 847-858, 2006.

[10] Chappell, M.A. and Payne, S.J. A physiological model of gas pockets in crevices and their behaviour under compression. Respiration Physiology and Neurobiology, 152: 100-114, 2006.

[9] Chappell, M.A. and Payne, S.J. A physiological model of the interaction between tissue bubbles and the formation of blood-borne bubbles under decompression. Physics in Medicine and Biology, 51: 2321-2338, 2006.

[8] Uzel, S., Chappell, M.A. and Payne, S.J. Modelling the cycles of growth and detachment of bubbles in carbonated beverages. Journal of Physical Chemistry B, 110: 7579-7586, 2006.

2005

[7] Payne, S.J., Ainsworth, R.W., Miller, R.J., Moss, R.W. and Harvey, N.W. Unsteady loss in a high pressure turbine stage: Interaction effects. International Journal of Heat and Fluid Flow, 26: 695-708, 2005.

[6] Chappell, M.A. and Payne, S.J. A method for the automated detection of venous gas bubbles in humans using Empirical Mode Decomposition. Annals of Biomedical Engineering, 33: 1362-1372, 2005.

[5] Payne, S.J. A Bayesian approach to the estimation of model parameters from noisy data sets. IEEE Signal Processing Letters, 12: 553-556, 2005.

[4] Payne, S.J. and Chappell, M.A. Automated determination of bubble grades from Doppler ultrasound recordings. Aviation, Space and Environmental Medicine, 76: 771-777, 2005.

[3] Payne, S.J., Arrol, H.P., Hunt, S.V. and Young, S.P. Automated classification and analysis of the calcium response of single T lymphocytes using a Neural Network approach. IEEE Transactions on Neural Networks, 16: 949-958, 2005.

2004

[2] Payne, S.J. Analysis of the effects of gravity and wall thickness in a model of blood flow through axi-symmetric vessels. Medical and Biological Engineering and Computing, 42: 799-806, 2004.

2003

[1] Payne, S.J., Ainsworth, R.W., Miller, R.J., Moss, R.W. and Harvey, N.W. Unsteady loss in a high pressure turbine stage. International Journal of Heat and Fluid Flow, 24: 698-708, 2003.

Book chapters

Payne, S.J. Methods in the analysis of the effects of gravity and wall thickness in blood flow through vascular systems. In World Scientific Publishing Company themed volume on 'Biomechanical Systems', ed. C.T. Leondes, 2007.

Conference papers

2011

Peng, T., O'Neill, D.P. and Payne, S.J. Mathematical study of the effects of different intrahepatic cooling on thermal ablation zones. Proceedings of 33rd IEEE EMBS conference, 6866-6869, 2011.

O'Neill, D.P., Peng, T. and Payne, S.J. The response of hepatocyte cell volume to hyperthermia and its role in oedema. Proceedings of 33rd IEEE EMBS conference, 4305-4308, 2011.

2010

Abatay, H. and Payne, S.J. Analysis of the effects of Nitric Oxide on vasomotion. Proceedings of 6th World Congress on Biomechanics, Volume 31, Part 3, pp. 863-866, 2010.

Lucas, C. and Payne, S.J. An anatomical model of the cerebral vasculature and the autoregulation of cerebral blood flow. Proceedings of 6th World Congress on Biomechanics, Volume 31, Part 2, pp. 446-449, 2010.

O'Neill, D.P., Peng, T. and Payne, S.J. Comparison of two mathematical models for hyper thermic cell death. Proceedings of 6th World Congress on Biomechanics, Volume 31, Part 2, pp. 748-751, 2010.

Park, C.S. and Payne, S.J. The effects of non-linearities on wave propagation and time-averaged flow in elastic axi-symmetric vessels. Proceedings of 6th World Congress on Biomechanics, Volume 31, Part 6, pp. 1181-1184, 2010.

Peng, T., O'Neill, D.P., Payne, S.J., Bost, C. and Flanagan, R. Mathematical modelling of directional effects of perfusion on liver tissue temperature of radio frequency ablation. Proceedings of 6th World Congress on Biomechanics, Volume 31, Part 2, pp. 740-743, 2010.

2009

Abatay, H. and Payne, S.J. A three-state non-linear model of vascular Nitric Oxide transport. Proceedings of 31st IEEE EMBS conference, 4917-4920, 2009.

O'Neill, D.P., Peng, T. and Payne, S.J. A two-equation coupled system model for determination of liver tissue temperature during Radio Frequency Ablation. Proceedings of 31st IEEE EMBS conference, 3893-3896, 2009.

Park, C.S. and Payne, S.J. The effects of non-linearities on shear stress in periodic flow in axi-symmetric vessels. Proceedings of 31st IEEE EMBS conference, 3944-3947, 2009.

Peng, T., O'Neill, D.P. and Payne, S.J. 1-D steady state analysis of a two-equation coupled system for determination of tissue temperature in liver during Radio Frequency Ablation. Proceedings of 31st IEEE EMBS conference, 3385-3388, 2009.

Su, S.-W. and Payne, S.J. A two phase model of oxygen transport in cerebral tissue. Proceedings of 31st IEEE EMBS conference, 4921-4924, 2009.

Su, S.-W. and Payne, S.J. Influence of the microvasculature on oxygen transport in human brain tissue. Proceedings of 2nd Micro and Nano Flows conference, 2009.

2007

Webb, I.R., Arora, M., Collin, J.R.T., Payne, S.J., Roy, R.A and Coussios, C.-C. The effect of HIFU-relevant rates of heating on the growth and dissolution of nuclei available for inertial cavitation. Proceedings of 19th International Congress on Acoustics, 2007.

2006

Chappell, M.A., Rowley, A.B. and Payne, S.J. Automatic Doppler bubble detection: The utility of wavelets. Proceedings of 31st EUBS conference, 2006.

Abatay, H., Rowley, A.B. and Payne, S.J. Instabilities in Nitric Oxide behaviour due to a flow feedback mechanism. Proceedings of IEE International Control Conference, 2006. [Winner of Best Student Paper Prize]

2005

Payne, S.J., Morris, H.J. and Rowley, A.B. A combined haemodynamic and biochemical model of cerebral autoregulation. Proceedings of 27th IEEE EMBS conference, 2295-2298, 2005.

Payne, S.J. and Stephens, C.J. The response of the cross-bridge cycle model to oscillations in intracellular calcium: A mathematical analysis. Proceedings of 27th IEEE EMBS conference, 7305-7308, 2005.

Payne, S.J. The estimation of cerebral metabolic rate of O2 from Near Infra-Red Spectroscopy. Proceedings of 27th IEEE EMBS conference, 3974-3977, 2005.

Chappell, M.A. and Payne, S.J. A crevice bubble growth model for the analysis of decompression sickness. Proceedings of 27th IEEE EMBS conference, 2240-2243, 2005.

2004

Chappell, M.A. and Payne, S.J. The use of the Hilbert-Huang transform in the automated detection of venous gas emboli. Proceedings of 30th EUBS conference, 181, 2004.

Payne, S.J. A two-layer model of the static behaviour of blood vessel walls. Proceedings of 26th IEEE EMBS conference, 3692-3695, 2004.

Ebden, M.J., Tarassenko, L., Payne, S.J., Darowski, A. and Price, J.D. Time-frequency analysis of the ECG for elderly vasovagal syncope patients. Proceedings of 26th IEEE EMBS conference, 290-293, 2004.

Chappell, M.A. and Payne, S.J. The automated detection of venous gas emboli using the Hilbert-Huang transform. Proceedings of 2nd PGBIOMED conference, 3-4, 2004.

Payne, S.J. and Tarassenko, L. Tissue Oxygenation Index as a measure of cerebral autoregulation. Proceeedings of 2nd BioMED conference, 546-550, 2004.

2002

Payne, S.J. Combined visualisation, novelty detection and classification. Proceedings of Royal Academy of Engineering BioMedical Futures Conference, 2002.

Payne, S.J. High frequency effects in unsteady entropy measurements. Proceedings of 16th Symposium on measuring techniques transonic and supersonic flow in cascades and turbomachines, 5-2: 1-8, 2002.

Payne, S.J. Combined visualisation, novelty detection and classification using probabilistic models. Proceedings of Natural Computing Applications Forum, 2002.